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Microbiomes of Velloziaceae from phosphorus-impoverished soils of the campos rupestres, a biodiversity hotspot. Authorship: CAMARGO, A. P.; SOUZA, R. S. C. de; COSTA, P. de B.; GERHARDT, I. R.; DANTE, R. A.; TEODORO, G. S.; ABRAHÃO, A.; LAMBERS, H.; CARAZZOLLE, M. F.; HUNTEMANN, M.; CLUM, A.; FOSTER, B.; FOSTER, B.; ROUX, S.; PALANIAPPAN, K.; VARGHESE, N.; MUKHERJEE, S.; REDDY, T. B. K.; DAUM, C.; COPELAND, A.; CHENM U, M. A.; IVANOVA, N. N.; KYRPIDES, N. C.; PENNACCHIO, C.; ELOE-FADROSH, E. A.; ARRUDA, P.; OLIVEIRA, R. S. The rocky, seasonally-dry and nutrient-impoverished soils of the Brazilian campos rupestres impose severe growth-limiting conditions on plants. Species of a dominant plant family, Velloziaceae, are hi... ... Repository: BDPA Publication year: 2019
Expected Genotype Quality and Diploidized Marker Data from Genotyping-by-Sequencing of Urocholoa spp. Tetraploids. Authorship: MATIAS, F. I.; MEIRELES, K. G. X.; NAGAMATSU, S. T.; BARRIOS, S. C. L.; VALE, C. B. do; CARAZZOLLE, M. F.; FRITSCHE-NETO, R.; ENDELMAN, J. B. Although genotyping-by-sequencing (GBS) is a well-established marker technology in diploids, the development of best practices for tetraploid species is a topic of current research. We determined the... ... Repository: BDPA Publication year: 2019
Transcriptome Analysis of Leaves, Flowers and Fruits Perisperm of Coffea arabica L. Reveals the Differential Expression of Genes Involved in Raffinose Biosynthesis. Authorship: IVAMOTO, S. T.; REIS JÚNIOR, O.; DOMINGUES, D. S.; SANTOS, T. B. dos; OLIVEIRA, F. F. de; POT, D.; LEROY, T.; VIEIRA, L. G. E.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; PEREIRA, L. F. P. Coffea arabica L. is an important crop in several developing countries. Despite its economic importance, minimal transcriptome data are available for fruit tissues, especially during fruit development... ... Repository: BDPA Publication year: 2017
High throughput transcriptome analysis of coffee reveals prehaustorial resistance in response to Hemileia vastatrix infection. Authorship: FLORES, J. C.; MOFATTO, L. S.; FREITAS-LOPES, R. do L.; FERREIRA, S. S.; ZAMBOLIM, E. M.; CARAZZOLLE, M. F.; ZAMBOLIM, L.; CAIXETA, E. T. Coffee rust disease, caused by the fungus Hemileia vastatrix, is one of the major diseases in coffee throughout the world. The use of resistant cultivars is considered to be the most effective control... ... Repository: BDPA Publication year: 2017
Identification of candidate genes for drought tolerance in coffee by high-throughput sequencing in the shoot apex of different Coffea arabica cultivars. Authorship: MOFATTO, L. S.; CARNEIRO, F. de A.; VIEIRA, N. G.; DUARTE, K. E.; VIDAL, R. O.; ALEKCEVETCH, J. C.; COTTA, M. G.; VERDEIL, J-L.; LAPEYRE-MONTES, F.; LARTAUD, M.; LEROY, T.; DE BELLIS, F.; POT, D; RODRIGUES, G. C.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; ANDRADE, A. C.; MARRACCINI, P. BACKGROUND: Drought is a widespread limiting factor in coffee plants. It affects plant development, fruit production, bean development and consequently beverage quality. Genetic diversity for drought... ... Repository: BDPA Publication year: 2016
Transcriptome analysis in Coffea eugenioides, an Arabica coffee ancestor, reveals differentially expressed genes inleaves and fruits. Authorship: YUYAMA, P. M.; REIS JUNIOR, O.; IVAMOTO, S. T.; DOMINGUES, D. S.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; CHARMETANT, P.; LEROY, T.; PEREIRA, L. F. P. Studies in diploid parental species of polyploid plants are important to understand their contributions to the formation of plant and species evolution. Coffea eugenioides is a diploid species that is... ... Repository: BDPA Publication year: 2016
Transcriptoma do cafeeiro (Coffea arabica L.) na interação com Hemileia vastatrix Berk. & BR. Authorship: FLOREZ, J. C.; CAIXETA, E. T.; FREITAS, R. do L.; MOFATO, L. S.; FALSARELLA CARAZZOLE, M.; ZAMBOLIM, L. Os estudos de transcriptoma revelam a expressão de determinados genes na célula em uma condição biológica específica. Em um patossistema, entender a expressão gênica é essencial para a identificação d... ... Repository: BDPA Publication year: 2015
Transcriptome analysis in leaves, flowers and initial fruit development of Coffea arabica L. Authorship: IVAMOTO, S. T.; REIS JUNIOR, O.; SAKURAY, L. M.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; PEREIRA, L. F. P. Repository: BDPA Publication year: 2015
Transcriptoma de frutos de Coffea arabica L. ao longo do seu desenvolvimento inicial. Authorship: IVAMOTO, S. T.; REIS JUNIOR, O.; CARAZZOLLE, M. F.; DOMINGUES, D. S.; PEREIRA, L. F. P. Neste trabalho foi realizado o seqüenciamento de RNA em larga escala de 12 bibliotecas de Coffea arabica cv. IAPAR59: folha, flor, frutos ao longo do seu desenvolvimento e frutos tratados com o induto... ... Repository: BDPA Publication year: 2013
A web-based bioinformatics interface applied to the GENOSOJA Project: databases and pipelines. Authorship: NASCIMENTO, L. C. do; COSTA, G. G. L.; BINNECK, E.; PEREIRA, G. A. G.; CARAZZOLLE, M. F. The Genosoja consortium is an initiative to integrate different omics research approaches carried out in Brazil. Basically, the aim of the project is to improve the plant by identifying genes involved... ... Repository: BDPA Publication year: 2012

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