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Assessment of copy number variants in three Brazilian locally adapted cattle breeds using whole-genome re-sequencing data. Authorship: PERIPOLLI, E.; STAFUZZA, N. B.; MACHADO, M. A.; PANETTO, J. C. do C.; EGITO, A. A. do; BALDI, F.; SILVA, M. V. G. B. Further characterization of genetic structural variations should strongly focus on small and endangered local breeds given their role in unraveling genes and structural variants underlying selective p... ... Repository: BDPA Publication year: 2023
Assessment of runs of homozygosity islands and estimates of genomic inbreeding in Gyr (Bos indicus) dairy cattle. Authorship: PERIPOLLI, E.; STAFUZZA, N. B.; MUNARI, D. P.; LIMA, A. L. F.; IRGANG, R.; MACHADO, M. A.; PANETTO, J. C. do C.; VENTURA, R. V.; BALDI, F.; SILVA, M. V. G. B. Abstract BACKGROUND: Runs of homozygosity (ROH) are continuous homozygous segments of the DNA sequence. They have been applied to quantify individual autozygosity and used as a potential inbreeding me... ... Repository: BDPA Publication year: 2018
A gene-transcription factor network associated with residual feed intake based on SNVs/InDels identified in Gir, Girolando and Holstein cattle breeds. Authorship: VERARDO, L. L.; STAFUZZA, N. B.; MUNARI, D. P.; ZERLOTINI NETO, A.; CHUD, T. C. S.; GARRICK, D. J.; COLE, J. B.; PANETTO, J. C. do C.; MACHADO, M. A.; MARTINS, M. F.; SILVA, M. V. G. B. The aim of this study was to analyze whole-genome re-sequencing data focusing on SNVs and InDels identified in Gir, Girolando and Holstein cattle breeds related to RFI. Thus, genes showing SNVs/InDels... ... Repository: BDPA Publication year: 2018
Genome-wide association study provides insights into genes related with horn development in Nelore beef cattle. Authorship: STAFUZZA, N. B.; SILVA, R. M. de O.; PERIPOLLI, E.; BEZERRA, L. A. F.; LOBO, R. B.; MAGNABOSCO, C. de U.; DI CROCE, F.; OSTERSTOCK, J.; MUNARI, D. P.; LOURENCO, D. A. L.; BALDI, F. Abstract The causal mutation for polledness in Nelore (Bos taurus indicus) breed seems to have appeared first in Brazil in 1957. The expression of the polled trait is known to be ruled by a few groups... ... Repository: BDPA Publication year: 2018
Avaliação de abordagens estatísticas para análise da expressão gênica diferencial em dados reais de RNA-Seq. Authorship: SBARDELLA, A. P.; FONSECA, I.; WELLER, M. M. D. C. A.; STAFUZZA, N. B.; OLIVEIRA, J. R.; WATANABE, R. N.; COSTA, R. M. da; CARVAJAL, A. B.; SILVA, M. V. G. B.; MARTINS, M. F.; MUNARI, D. P. Repository: BDPA Publication year: 2017
Single nucleotide variants and InDels identified from whole-genome re-sequencing of Guzerat, Gyr, Girolando and Holstein cattle breeds. Authorship: STAFUZZA, N. B.; ZERLOTINI NETO, A.; LOBO, F. P.; YAMAGISHI, M. E. B.; CHUD, T. C. S.; CAETANO, A. R.; MUNARI, D. P.; GARRICK, D. J.; MACHADO, M. A.; MARTINS, M. F.; CARVALHO, M. R.; COLE, J. B.; SILVA, M. V. G. B. Whole-genome re-sequencing, alignment and annotation analyses were undertaken for 12 sires representing four important cattle breeds in Brazil: Guzerat (multi-purpose), Gyr, Girolando and Holstein (da... ... Repository: BDPA Publication year: 2017
Avaliação de abordagens estatísticas para análise da expressão gênica diferencial em dados reais de RNA-seq Authorship: SBARDELLA, A. P; FONSECA, I.; WELLER, M. A. DEL C. A.; STAFUZZA, N. B.; OLIVEIRA, J. R.; WATANABE, R. N.; COSTA, R, M. da; CARVAJAL, A. B.; SILVA, M. V. G. B.; MARTINS, M. F.; MUNARI, D. P. Repository: BDPA Publication year: 2017
Ilhas de homozigose para identificação de genes relacionados com características de importância econômica na pecuária leiteira em bovinos da raça Gir (Bos primigenius indicus) Authorship: PERIPOLLI, E.; CHIAIA, H. L. J.; BERTON, M. P.; KLUSKA, S.; STAFUZZA, N. B.; MUNARI, D. P.; PANETTO, J. C. do C.; MACHADO, M. A.; VENTURA, R. V.; BALDI, F.; SILVA, M. V. G. B. Repository: BDPA Publication year: 2017
Association of RUNX2 and TNFSF11 genes with production traits in a paternal broiler line. Authorship: GRUPIONI, N. V.; STAFUZZA, N. B.; CARVAJAL, A. B.; IBELLI, A. M. G.; PEIXOTO, J. de O.; LEDUR, M. C.; MUNARI, D. P. Abstract: Intense selection for production traits has improved the genetic gain of important economic traits. However, selection for performance and carcass traits has led to the onset of locomotors p... ... Repository: BDPA Publication year: 2017
Candidate genes for male and female reproductive traits in Canchim beef cattle. Authorship: BUZANSKAS, M. E.; GROSSI, D. do A.; VENTURA, R. V.; SCHENKEL, F. S.; CHUD, T. C. S.; STAFUZZA, N. B.; ROLA, L. D.; MEIRELLES, S. L. C.; MOKRY, F. B.; MUDADU, M. de A.; HIGA, R. H.; SILVA, M. V. G. B.; ALENCAR, M. M. de; REGITANO, L. C. de A.; MUNARI, D. P. Background: Beef cattle breeding programs in Brazil have placed greater emphasis on the genomic study of reproductive traits of males and females due to their economic importance. In this study, genom... ... Repository: BDPA Publication year: 2017

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